2022/08-至今,中国农业大学,农学院,副教授
2020/10-2022/08,中国农业大学,博士后
2016/09-2020/06,中国农业大学,农学院,作物遗传育种专业,博士
2008/09-2011/06,清华大学,生物科学与技术系,海洋生物学专业,硕士
2004/09-2008/06,中国农业大学,生物学院,生物科学专业,学士
主要从事植物基因组学与生物信息学研究。通过机器学习和人工智能等技术,开展玉米全基因组选择模型和智能设计育种模型研究、进行大规模种质资源基因挖掘和调控模式研究、开发新型多组学数据生物信息学分析算法和工具。
中国博士后科学基金面上资助
中国博士后科学基金特别资助(站前)
Yan J, Wang X. Machine learning bridges omics sciences and plant breeding. Trends in Plant Science, 2022.
Yan J, Wang X. Unsupervised and semi-supervised learning: the next frontier in machine learning for plant systems biology. Plant Journal, 2022, 111: 1527-1538.
Liu S, Xu F, Xu Y, Wang Q, Yan J, Wang J, Wang X, Wang X. MODAS: exploring maize germplasm with multi-omics data association studies. Science Bulletin, 2022, 67(9): 903-906.
Yan J, Xu Y, Cheng Q, Jiang S, Xiao Y, Ma C, Yan J B, Wang X. LightGBM: Accelerated genomically designed crop breeding through ensemble learning. Genome Biology, 2021, 22(1): 1-24.
Xiao Y, Jiang S, Cheng Q, Wang X, Yan J, Zhang R, Qiao F, Ma C, Luo J, Li W, Liu H, Yang W, Song W, Meng Y, Warburton M L, Zhao J, Wang X, Yan J B. The genetic mechanism of heterosis utilization in maize improvement. Genome Biology, 2021, 22(1): 1-29.
Yang C, Yan J, Jiang S, Li X, Min H, Wang X, Hao D. Resequencing 250 soybean accessions: new insights into genes associated with agronomic traits and genetic networks. Genomics, Proteomics & Bioinformatics, 2021.
Yan J, Zhai H, Zhu L, Sa S, Ding X. obaDIA: one-step biological analysis pipeline for data-independent acquisition and other quantitative proteomics data. Bioinformatics, 2021, 37(14): 2066-2067.
Yan J, Zou D, Li C, Zhang Z, Song S, Wang X. SR4R: An integrative SNP resource for genomic breeding and population research in rice. Genomics, Proteomics & Bioinformatics. 2020, 18(2): 173–185.
Jiang S, Cheng Q, Yan J, Fu R, Wang X. Genome optimization for improvement of maize breeding. Theoretical and Applied Genetics, 2020, 133:1491–1502.
Liang P, Liu S, Xu F, Jiang S, Yan J, He Q, Liu W, Lin C, Zheng F, Wang X, Miao W. Powdery mildews are characterized by contracted carbohydrate metabolism and diverse effectors to adapt to obligate biotrophic lifestyle. Frontiers in Microbiology, 2018, 9:3160.
He L, Fu S, Xu Z, Yan J, Xu J, Zhou H, Zhou J, Chen X, Li Y, Au K F, Yao H. Hybrid sequencing of full-length cDNA transcripts of stems and leaves in Dendrobium officinale. Genes, 2017, 8(10):257.
Yan J, Lv S, Hu M, Gao Z, He H, Ma Q, Deng X W, Zhu Z, Wang X. Single-molecule sequencing assists genome assembly improvement and structural variation inference. Molecular Plant, 2016, 9(7): 1085–1087.
Li A, Liu D, Wu J, Zhao X, Hao M, Geng S, Yan J, Jiang X, Zhang L, Wu J, Yin L, Zhang R, Wu L, Zheng Y, Mao L. mRNA and small RNA transcriptomes reveal insights into dynamic homoeolog regulation of allopolyploid heterosis in nascent hexaploid wheat. Plant Cell, 2014, 26(5): 1878–1900.
Yan J, Cai Z. Molecular evolution and functional divergence of the cytochrome P450 3(CYP3) family in Actinopterygii (ray-finned fish). PLoS ONE, 2010, 5(12): 1–10.